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Apricot Tree Diseases: How to Identify, Treat, and Prevent Apricot Tree Diseases

If you have apricot trees, or even one apricot tree, chances are that you have made a special effort to grow a special crop. Apricot tree diseases can undo years of work in just a few days, but most apricot tree diseases are identifiable, treatable, and sometimes preventable. Here is what you need to know about the most common apricot tree diseases.

Apricot Tree Diseases

Armillaria Root Rot (Oak Root Fungus, also known as Apricot Fungus)

Symptoms and Signs

Sometimes apricot trees go through a general decline one year and just don’t come back the next spring. A frequent cause of this kind of apricot decline is armillaria root rot, which is also known as oak root fungus.

Apricot trees affected with this disease show a general decline in vigor a year or two before the whole tree collapses. Usually there will be a circular area in an orchard where every tree is affected as the fungus spreads. The fungus spreads along the roots of infected trees to healthy trees. Sometimes a tree will leaf out and die in late spring, but more often the tree just doesn’t leaf out.

Peaches can also get armillaria root rot. You can tell the difference between Armillaria and Phytophthora root rot by the yellow, fan-shaped mats of fungus between the bark and the wood. Sometimes the fungus puts out dark brown or black “horns” above the soil from the roots.

What You Need to Know About This Apricot Tree Disease

Armillaria root rot can survive in the soil for years after the tree dies.

How You Can Manage This Disease

Apricot trees with this fungus cannot be saved. Trees that are grafted on Marianna 2624 rootstocks are more resistant to this fungus than most, but aren’t completely immune.

Bacterial Canker

Apricot Tree Diseases: Bacterial Canker
Sunken canker on trunk of tree, a common symptom of Bacterial Canker

Symptoms and Signs

Bacterial canker also becomes obvious in the spring. Sometimes limbs die back, but more often the first sign is amber-colored ooze on the trunk. There can be spots on the leaves and odd formations on young shoots. Called blasts, these formations encase the shoot in a clear ooze before it dies.

There can be orange and red flecks on the tree outside the areas killed by the canker. The tree may try to survive by sprouting numerous suckers near ground level or from limbs before the parts of the tree that are affected by the disease.

The organism that causes bacterial canker, Pseudomonas syringae, lives on the surface of the tree and is spread by splashing rain. It multiplies when the weather is warm and rainy in the spring. Healthy plants won’t get the disease when it splashes on them, but stressed trees are. 

What kinds of stress will cause apricot trees to get bacterial canker? Spring frosts weaken apricot trees so they come down with it, as will nematodes.Commercial growers will fumigate the ground to prevent the disease.

What You Need to Know About This Disease

Bacterial canker is worse in trees planted in shallow soils, especially if there is hard pan clay about 3 feet (a meter) down.

How You Can Manage This Disease

Anything that keeps apricot trees healthier, such as irrigation when needed, winter fertilizer in appropriate amounts builds resistance to bacterial canker. It can also help to wait until spring to do pruning.

Apricot Tree Diseases: Brown Rot 

Apricot with Brown Rot
Rotten apricot infested with brown rot fungus (Monilinia laxa) during spring.

Symptoms and Signs

Brown rot starts with the death of young blossoms and the twigs and leaves near them. The infection moves from flowers to twigs as it forms cankers in the bark of limbs. There will be a gummy substance at the base of infected flowers. The cankers will have tan centers and black margins. In a rainy spring, grayish-brown spores will be visible on the dead flowers.

What You Need to Know About This Disease

This fungus survives from year to year on mummified fruits left on the ground beneath the apricot tree. It spreads to new apricot trees when splashes of rain carry the fungus from the ground to the limbs of the tree.

How You Can Manage This Disease

There is a lot you can do to control brown rot:

  • Remove mummy fruit from under apricot trees immediately after harvest or during the winter.
  • Cultivate the soil underneath the tree to break up and cover mummified fruit.
  • Apply bloom fungicides two or three times to control brown rot flower and twig blight, two in normal weather, three if you are having a rainy spring. The best time to apply fungicide is when the flower buds first turn red.
  • Spray every two weeks to ensure continuing protection. If you have an extended rainy spell, spray fungicide every 7 to 10 days..

Eutypa Die Back 

Gummosis, the formation of patches of a gummy substance on the surface of fruit trees.

Symptoms and Signs

Eutypa die back, also known as gummosis, causes whole branches to die in the late spring with their leaves still attached. The bark will be discolored and covered with am amber gum. The cambium and xylem inside the branch will be discolored brown.

What You Need to Know About This Disease

Disease organisms infect freshly pruned wood in the early spring if you prune just before it rains. The disease can also infect apricot trees that are pruned in the summer or fall just before they are irrigated, or it rains. The disease also spreads if you do not remove all infected wood when you prune.

How You Can Manage This Disease

Remove infected limbs in the summer after you harvest the fruit during dry weather. Don’t irrigate your trees for a couple of weeks after pruning. Except when you are pruning your apricot tree during an extended period of hot, dry weather, paint all pruning wounds with organic or chemical fungicide.

Powdery Mildew

Papay fruits infeced with powdery mildew
Papay fruits infeced with powdery mildew

Symptoms and Signs

Powdery is the familiar white, web-like growth that can appear on plants of all kinds overnight. Apricot trees affected by powdery mildew may have scabs and red or purple splotches. They are OK for making jams and pies at home, but they aren’t salable.

What You Need to Know About This Disease

Apricot trees most often get powdery mildew from infected rose bushes. Different species of fungi cause the condition in spring, summer, and fall. Winter cold will kill them.

How You Can Manage This Disease

Don’t plant apricot trees near roses. Begin spraying for powdery mildew as soon as blossoms have opened in the spring. It is important to stop mildew at the earliest stage of fruit development possible. Apricot fruit becomes resistant to new infections after the pit begins to harden, but older infections may still affect the fruit.

Ripe Fruit Rot

Ripe Fruit Rot

Symptoms and Signs

Ripe fruit rot is probably the most disappointing apricot tree disease. This fungal infection causes brown, circular, firm spots to spread over ripening fruit overnight. Tan masses of spores will pop up in the middle of the spots. Ripe fruit rot most often affects fruit that is within a day or two of harvest. Diseased apricot fruits that stay on the tree will become a source of ripe fruit rot the next year.

What You Need to Know About This Disease

Ripe fruit rot is most likely to occur when it rains on ripe fruit. The disease won’t occur if overnight temperatures fall below 67 degrees Fahrenheit (19 degrees Celsius).

How You Can Manage This Disease

There are things you can do to prevent ripe fruit rot:

  • Avoid giving your apricot trees too much nitrogen fertilizer.
  • Irrigate in the morning, not in the afternoon, and absolutely not at night. Overnight humidity gives the fungus a chance to grow.
  • Control blossom rot (see above) in the early spring.

Shot Hole Disease

Shot Hole Disease
Leaves of cherry laurel Prunus laurocerasus affected by leaf spot fungi Stigmina carpophila (Shot Hole Disease)

Symptoms and Signs

The fungus that caused shot hole disease causes spots on leaves that fall as if they had been shot out with a BB gun. A severe infestation of this disease can cause all the apricot tree’s leaves to fall in the spring. It can also cause brown areas of decay with dark purple margins to appear on the top edges of ripening fruit. As the fruit ripens, it may become covered with scabs.

What You Need to Know About This Disease

This is another fungus that is spread by rain. It can overwinter on infected twigs. There is a similar condition caused by summer fog, but fog spot does not affect the leaves.

How You Can Manage This Disease

You can prevent shot hole disease by applying fungicides in the winter. The more it rains in the winter, the more spraying you will need to do.

Verticillium Wilt

Verticillium Wilt
blackcurrant leaves damaged by fungal disease Fusarium or Verticillium wilt

Symptoms and Signs

It’s hard to miss verticillium wilt. The leaves on one and usually more branches, often on just one side of the apricot tree, turn yellow, wilt, and fall off in late spring. The shoots on which they were growing will curl up, die, and dry up. If you cut off an affected limb, you will see dark discoloration inside. 

Verticillium wilt is  usually a disease of younger trees. Mature trees are not affected. Even when leaves and branches do not die and fall off, fruit yields may be affected.

What You Need to Know About This Disease

Verticillium bacteria accumulate in the soil of ground used to grow cotton or tomatoes.

How You Can Manage This Disease

Verticillium wilt is something you can prevent but you can’t treat. The summer before you plant apricot trees, cover the soil with clear UV-stable plastic to heat it up so microorganisms in it will die. Then, after you set out your apricot trees, surround them with a ring of black plastic to make sure the bacteria don’t get into the tree’s root system from somewhere else on your property. Never plant apricots, tomatoes, or melons in the same location.

Wrapping Up Apricot Tree Diseases

If you have any questions about any other apricot tree diseases, can’t identify what you’re dealing with, or have any general questions, leave a comment below.

Excited for more apricot content? Then check out my apricot page for more info guides, growing tips, recipes, and more!

Kay Phillips

Friday 2nd of June 2023

I live in northern Utah (Wasatch county). I have an apricot tree that was pruned in mid-April and bloomed in May. We sprayed dormant oil in April. It was covered in blossoms and appeared healthy. When blossoms were gone we sprayed with fruit tree fungicide. Last week I noticed that the majority of the tree has wilted. Green leaves very droopy. What could be the problem? What do I do?


Monday 12th of June 2023

It sounds like your apricot tree is experiencing some stress, indicated by the droopy green leaves. Here are a few potential problems and solutions:

Watering Issues: Both overwatering and underwatering can cause leaf wilting. Overwatering can suffocate the roots, while underwatering leaves them dehydrated. Be sure to provide the tree with enough water but also allow it to dry out between waterings. The soil should be moist but not soaking wet.

Disease or Pest Problem: Various diseases or pests can also cause wilting. Verticillium wilt is a soil-borne fungal disease that can cause wilting, and it can affect apricot trees. Additionally, pests such as aphids, borers, or root nematodes could be damaging the tree. You might need to consult with a local extension service or a certified arborist to get an accurate diagnosis and treatment plan.

Environmental Stress: Sudden changes in weather, especially extreme heat or cold, can stress the tree and lead to wilting. The tree may recover on its own once the weather stabilizes.

Root Damage: If the tree's roots have been damaged or disturbed (due to construction, digging, etc.), this can cause wilting.

Nutrient Deficiency: While less common, nutrient deficiencies can also lead to wilt. Yellowing leaves often accompany wilt in these cases.

To identify the problem, check for other symptoms such as discolored leaves, spots, or visible pests. Look at the base of the tree to see if there's any damage or evidence of pests.

As for what to do, if you determine it's a watering issue, adjust your watering schedule as needed. If you suspect a disease or pest, you might want to contact a professional arborist or your local extension service for advice on how to treat the issue. Remember that trees can take some time to recover, so it may be a while before you see improvement.

Also, consider getting a soil test to identify any potential nutrient deficiencies or pH imbalances that might be affecting your tree. You can typically purchase soil test kits at garden centers or online, or you can contact your local extension service for assistance. The results of the soil test can guide you on whether you need to amend the soil to correct any deficiencies or imbalances.

Remember that it's always best to diagnose the problem accurately before applying any treatments, as the wrong treatment could potentially exacerbate the issue.

Deborah Rumage

Monday 29th of May 2023

My apricot tree was planted by the previous owners of my house and they are deceased so I Dont know how old it is. It has been doing great in the 6 yrs I have lived there. But this year it looks like some of the leaves are covered in black bugs little bitty things but it’s not bugs . The fruit does not seem to be affected. When I noticed it about 8 was ago . I trimmed off the affected branches and sprayed with detergent water. But it came back again.Do you know what it is


Wednesday 31st of May 2023

Sorry, no; not without seeing it.

Dawn McLaughlin

Tuesday 23rd of May 2023

We have a new moorpark apricot tree. The leaves are curling & the ends are turning whiteish. However some have small holes like bb gun shots throughout. I do have photos if needed.


Wednesday 19th of April 2023

Help! I have an apricot tree that was planted 2 years ago. It was growing very nicely but all of a sudden started wilting all over and looks worse every day. I don’t see any bugs or damage. What could it be and what can I do?


Saturday 22nd of April 2023

Possibly girdled or partially girdled. I've lost a lot of trees this year due to voles & rabbits over the winter.

Daniel brown

Friday 24th of February 2023

The apricot tree is over 38 years old. It has green blotches on the biggest limbs, not so much on the trunk. One of the bigger limbs broke off in the wind last winter. The other limb looks to do the same thing this winter. I have read to prune it but not sure. The other limb looks heavy. I can provide pictures. Thanks.